Software

Amnesia (MS-Windows application, by Ian Henderson)
Biodiversity Atlas (Web application, on top of Google AppEngine, by Tim Robertson, Sergio Alvarez Leiva, and Javier de la Torre)
Clique (Pascal version with source code, part of the PHYLIP package by Joe Felsenstein)
Croizat (GNU/Linux, Mac OS X, MS-Windows application, with Python source code, by Mauro Cavalcanti)
CReader (Project proposal, by Brad McFall)
GenGIS (MS-Windows & Mac OS X application, with Python source code, by Donovan Parks, Robert Beiko et al.)
Martitracks (GNU/Linux, MS-Windows application, with Free Pascal source code, by Daniel Miranda-Esquivel and Susy Echeverria)
NDM/VNDM (MS-Windows application, with C source code, by Pablo Goloboff and Claudia Szumik)
PASSaGE (MS-Windows application, by Michael Rosenberg)
Trazos2004 (ArcView GIS extension, by Camilo Rojas)
VIP (GNU/Linux & MS-Windows application, with C source code, by J. Salvador Arias)